Browsing by subject Genome-scale metabolic models

Jump to: 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

or enter first few letters:  

Showing results 1 to 19 of 19.
Issue DateTitleAuthor(s)TypeAccess
Dec-2013Algorithms to infer metabolic flux ratios from fluxomics dataCarreira, Rafael; Rocha, Miguel; Villas-Bôas, S. G., et al.Conference paperOpen access
2021Biochemical complex data generation and integration in genome-scale metabolic modelsRibeiro, João Manuel Capela AraújoMaster thesis Open access
20-Jun-2019Comparison of pathway analysis and constraint-based methods for cell factory designVieira, Vítor; Maia, Paulo; Rocha, Miguel, et al.ArticleOpen access
Jun-2016A computation tool for the estimation of biomass composition from genomic and transcriptomic informationSantos, Sophia Torres; Rocha, IsabelConference paperRestricted access (UMinho)
14-Dec-2018Development of bioinformatics tools for the classification of transporter systemsLagoa, Davide Rafael SantosMaster thesis Open access
6-Dec-2018Development of bioinformatics tools to accelerate the reconstruction of genome-scale modelsMorais, José Amaro FerreiraMaster thesis Open access
2013Development of computational methods for the determination of biomass composition and evaluation of its impact in genome-scale models predictionsSantos, Sophia TorresMaster thesis Open access
2017Genome-Scale Metabolic Network Reconstruction of the dairy bacterium Streptococcus thermophilusCruz, Fernando João Pereira daMaster thesis Open access
2017Genome-wide semi-automated annotation of transporter systemsDias, Oscar; Gomes, Daniel G.; Vilaça, P., et al.ArticleOpen access
12-Aug-2019Inferring optimal minimal medium on genome-scale metabolic models using evolutionary algorithmsSantos, Sophia Torres; Correia, Sara; Rocha, IsabelOral presentationOpen access
Aug-2020Metabolic engineering strategies for butanol production in Escherichia coliFerreira, Ana Sofia Araújo; Pereira, Rui; Wahl, S. Aljoscha, et al.ArticleOpen access
2019Metabolite integration pipeline for the improvement of human metabolic modelsVieira, Vítor; Ferreira, Jorge; Rodrigues, Rúben André Costa, et al.Conference paperRestricted access (UMinho)
8-Dec-2016MIYeastK: The Metabolic Integrated Yeast KnowledgebaseSantos, Sophia; Liu, F.; Costa, Christopher, et al.AbstractOpen access
2019A model integration pipeline for the improvement of human genome-scale metabolic reconstructionsVieira, Vítor; Ferreira, Jorge; Rodrigues, Rúben André Costa, et al.ArticleOpen access
2019Modelling interspecies interactions of syntrophic communities of Syntrophobacter fumaroxidans and Methanospirillum hungateiBastos, José Jorge SampaioMaster thesis Open access
7-Jan-2018Reconstructing high-quality large-scale metabolic models with merlinDias, Oscar; Rocha, Miguel; Ferreira, Eugénio C., et al.Book partRestricted access (UMinho)
17-Sep-2020A review of methods for the reconstruction and analysis of integrated genome-scale models of metabolism and regulationCruz, Fernando; Faria, José Pedro; Rocha, Miguel, et al.ArticleOpen access
2022Towards a multivariate analysis of genome-scale metabolic models derived from the BiGG models databaseOliveira, Alexandre Rafael Machado; Cunha, Emanuel Rodrigues; Cruz, Fernando João Pereira da, et al.Conference paperOpen access
2020Troppo - A Python framework for the reconstruction of context-specific metabolic modelsFerreira, Jorge M. L.; Vieira, Vítor; Gomes, Jorge, et al.Conference paperOpen access