| Data | Título | Autor(es) | Tipo | Acesso |
| Dez-2005 | Evolutionary programming as a platform for in silico metabolic engineering | Patil, Kiran Raosaheb; Rocha, I.; Förster, Jochen, et al. | Artigo | Acesso aberto |
| 3-Nov-2009 | Heuristics for simulated annealing search of active sub-networks in bio-molecular interaction networks | Soares, Simão; Rocha, I.; Patil, Kiran Raosaheb | Resumo em ata de conferência | Acesso aberto |
| 2013 | Identification of metabolic engineering targets through analysis of optimal and sub-optimal routes | Soons, Zita; Ferreira, Eugénio C.; Patil, Kiran Raosaheb, et al. | Artigo | Acesso aberto |
| 2011 | Identification of metabolic engineering targets through pathway analysis | Soons, Zita; Patil, Kiran Raosaheb; Rocha, I. | Resumo em ata de conferência | Acesso aberto |
| 1-Out-2006 | An improved evolutionary algorithm-based framework for identifying in silico metabolic engineering targets | Rocha, I.; Rocha, Miguel; Ferreira, Eugénio C., et al. | Resumo em ata de conferência | Acesso aberto |
| 2017 | Integration of biomass formulations of genome-scale metabolic models with experimental data reveals universally essential cofactors in prokaryotes | Xavier, Joana Rute Calça; Patil, Kiran Raosaheb; Rocha, Isabel | Artigo | Acesso aberto |
| 16-Nov-2018 | Metabolic models and gene essentiality data reveal essential and conserved metabolism in prokaryotes | Xavier, Joana C.; Patil, Kiran Raosaheb; Rocha, I. | Artigo | Acesso aberto |
| 2010 | Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes | Zelezniak, Aleksej; Pers, Tune H.; Soares, Simão, et al. | Artigo | Acesso aberto |
| 2008 | Natural computation meta-heuristics for the in silico optimization of microbial strains | Rocha, Miguel; Maia, Paulo; Mendes, Rui, et al. | Artigo | Acesso aberto |
| 27-Jun-2009 | OptFlux: a software for metabolic engineering | Rocha, I.; Maia, Paulo; Pinto, José P., et al. | Resumo em ata de conferência | Acesso aberto |
| Abr-2010 | OptFlux: an open-source software platform for in silico metabolic engineering | Rocha, I.; Maia, Paulo; Evangelista, Pedro, et al. | Artigo | Acesso aberto |
| 2012 | Random sampling of elementary flux modes in large-scale metabolic networks | Machado, C. D.; Soons, Zita; Patil, Kiran Raosaheb, et al. | Artigo | Acesso aberto |
| 26-Jun-2016 | Rational modular design of yeast strains towards overproduction of industrially relevant products | Lopes, H.; Maia, Paulo; Patil, Kiran Raosaheb, et al. | Resumo em ata de conferência | Acesso aberto |
| 2014 | Standardization and comparison of the biomass objective functions of manually curated genome-scale metabolic models | Xavier, Joana Rute Calça; Patil, Kiran Raosaheb; Rocha, I. | Resumo em ata de conferência | Acesso aberto |
| 2014 | Systems biology perspectives on minimal and simpler cells | Xavier, Joana Rute Calça; Patil, Kiran Raosaheb; Rocha, I. | Artigo | Acesso restrito UMinho |
| 2011 | Towards a biologically relevant description of phenotypes based on pathway analysis | Soons, Zita; Rocha, I.; Patil, Kiran Raosaheb | Resumo em ata de conferência | Acesso aberto |
