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Issue DateTitleAuthor(s)TypeAccess
2006Adaptive evolution of a recombinant lactose-consuming Saccharomyces cerevisiae strainGuimarães, Pedro M. R.; Parrou, J. L.; Le Berre, V., et al.AbstractOpen access
2012An integrated computational environment for elementary modes analysis of biochemical networksMaia, P.; Vilaça, P.; Rocha, I., et al.ArticleRestricted access (UMinho)
2018Analyzing and designing cell factories with OptFluxVilaça, Paulo Ricardo Carvalho; Maia, Paulo; Giesteira, Hugo Miguel Melo, et al.Book partRestricted access (UMinho)
2020Assessment of microbial community interactions using different toolsRibeiro, Catarina MoreiraMaster thesis Open access
1-Jul-2008Evaluating evolutionary multiobjective algorithms for the in silico optimization of mutant strainsMaia, Paulo; Rocha, I.; Ferreira, Eugénio C., et al.Conference paperOpen access
2012Exploring the gap between dynamic and constraint-based models of metabolismMachado, C. D.; Costa, Rafael S.; Ferreira, Eugénio C., et al.ArticleOpen access
2008A framework for the integrated analysis of metabolic and regulatory networksMendes, Rui; Lourenço, Anália; Carneiro, S., et al.Conference paperOpen access
2011Genome scale metabolic network reconstruction of pathogen – Enterococcus faecalisPortela, Carla; Villas-Bôas, S. G.; Ferreira, Eugénio C., et al.AbstractOpen access
16-Dec-2013Genome scale metabolic network reconstruction of the pathogen Enterococcus faecalisPortela, Carla; Villas-Bôas, S. G.; Rocha, I., et al.Conference paperOpen access
31-Dec-2019Genome-scale metabolic modelling of the pathogen Xylella fastidiosaSilva, Miguel Ângelo Fernandes daMaster thesis Open access
2017Genome-Scale Metabolic Network Reconstruction of the dairy bacterium Streptococcus thermophilusCruz, Fernando João Pereira daMaster thesis Open access
4-Dec-2019Genome-scale reconstruction of the metabolic model of the probiotic bacterium Lactobacillus acidophilusCunha, Emanuel Rodrigues daMaster thesis Open access
2017Identification of robust strain designs via tandem pFBA/LMOMA phenotype predictionMaia, Paulo; Rocha, Isabel Cristina Santos; Rocha, MiguelConference paperOpen access
2014iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactisDias, Oscar; Pereira, R. M.; Gombert, Andreas Karoly, et al.ArticleOpen access
2009Large scale dynamic model reconstruction for the central carbon metabolism of escherichia coliCosta, Rafael S.; Machado, C. D.; Rocha, I., et al.Conference paperOpen access
2010Merlin: metabolic models reconstruction using genome-scale informationDias, Oscar; Rocha, Miguel; Ferreira, Eugénio C., et al.Conference paperOpen access
2013Metabolic responses to recombinant bioprocesses in Escherichia coliCarneiro, S.; Ferreira, Eugénio C.; Rocha, I.ArticleOpen access
2016Metabolic systems biology: tools for model-based analysis and design of microbial systemsRocha, IsabelAbstractOpen access
Apr-2018Metabolite secretion in microorganisms: the theory of metabolic overflow put to the testPinu, Farhana R.; Granucci, Ninna; Daniell, James, et al.ArticleOpen access
Jul-2021Model-guided development of an evolutionarily stable yeast chassisPereira, Filipa; Lopes, Hélder; Maia, Paulo, et al.ArticleRestricted access (UMinho)