Utilize este identificador para referenciar este registo:
https://hdl.handle.net/1822/61824
Título: | WebSpecmine: a website for metabolomics data analysis and mining |
Autor(es): | Cardoso, Sara Afonso, T. Maraschin, Marcelo Rocha, Miguel |
Palavras-chave: | metabolomics statistical analysis data mining metabolite identification pathway analysis open-source software |
Data: | 10-Out-2019 |
Editora: | MDPI AG |
Revista: | Metabolites |
Citação: | Cardoso, Sara; Afonso, T.; Maraschin, Marcelo; Rocha, Miguel, WebSpecmine: a website for metabolomics data analysis and mining. Metabolites, 9(10), 237, 2019 |
Resumo(s): | Metabolomics data analysis is an important task in biomedical research. The available tools do not provide a wide variety of methods and data types, nor ways to store and share data and results generated. Thus, we have developed WebSpecmine to overcome the aforementioned limitations. WebSpecmine is a web-based application designed to perform the analysis of metabolomics data based on spectroscopic and chromatographic techniques (NMR, Infrared, UV-visible, and Raman, and LC/GC-MS) and compound concentrations. Users, even those not possessing programming skills, can access several analysis methods including univariate, unsupervised and supervised multivariate statistical analysis, as well as metabolite identification and pathway analysis, also being able to create accounts to store their data and results, either privately or publicly. The tool’s implementation is based in the R project, including its shiny web-based framework. Webspecmine is freely available, supporting all major browsers. We provide abundant documentation, including tutorials and a user guide with case studies. |
Tipo: | Artigo |
URI: | https://hdl.handle.net/1822/61824 |
DOI: | 10.3390/metabo9100237 |
e-ISSN: | 2218-1989 |
Versão da editora: | http://www.mdpi.com/journal/metabolites |
Arbitragem científica: | yes |
Acesso: | Acesso aberto |
Aparece nas coleções: | CEB - Publicações em Revistas/Séries Internacionais / Publications in International Journals/Series |
Ficheiros deste registo:
Ficheiro | Descrição | Tamanho | Formato | |
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document_52128_1.pdf | 343,7 kB | Adobe PDF | Ver/Abrir |
Este trabalho está licenciado sob uma Licença Creative Commons