| Data | Título | Autor(es) | Tipo | Acesso |
| 2020 | Assessment of microbial community interactions using different tools | Ribeiro, Catarina Moreira | Dissertação de mestrado | Acesso aberto |
| 31-Jul-2023 | Blueprint: documenting the complexity of metabolic regulation by reconstruction of integrated metabolic-regulatory models | Cruz, Fernando João Pereira | Tese de doutoramento | Acesso aberto |
| 5-Fev-2022 | A genome-scale metabolic model for the human pathogen Candida Parapsilosis and early identification of putative novel antifungal drug targets | Viana, Romeu; Couceiro, Diogo; Carreiro, Tiago, et al. | Artigo | Acesso aberto |
| 25-Mai-2022 | Genome-scale metabolic modelling of an extremophile microbial community | Nunes, Rui Ricardo Barros | Dissertação de mestrado | Acesso aberto |
| 31-Dez-2019 | Genome-scale metabolic modelling of the pathogen Xylella fastidiosa | Silva, Miguel Ângelo Fernandes da | Dissertação de mestrado | Acesso aberto |
| 4-Dez-2019 | Genome-scale reconstruction of the metabolic model of the probiotic bacterium Lactobacillus acidophilus | Cunha, Emanuel Rodrigues da | Dissertação de mestrado | Acesso aberto |
| 2014 | iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactis | Dias, Oscar; Pereira, R. M.; Gombert, Andreas Karoly, et al. | Artigo | Acesso aberto |
| Mar-2019 | Mapping Salmonella typhimurium pathways using ¹³C metabolic flux analysis | Correia, Daniela M.; Sargo, C.; Silva, A., et al. | Artigo | Acesso aberto |
| 2013 | Reconstruction of a genome-scale metabolic model for the filamentous fungus Ashbya gossypii | Gomes, Daniel Gonçalves; Dias, Oscar; Ferreira, Eugénio C., et al. | Resumo em ata de conferência | Acesso aberto |
| 2017 | Reconstruction of the genome-scale metabolic model of Nitrosomonas europaea | Raposo, Pedro Miguel Brígida | Dissertação de mestrado | Acesso aberto |
| 2023 | Systems biology's role in leveraging microalgal biomass potential: Current status and future perspectives | Cunha, Emanuel; Sousa, Vítor; Geada, Pedro, et al. | Artigo | Acesso aberto |
| 2021 | Towards the reconstruction of the genome-scale metabolic model of Lactobacillus acidophilus La-14 | Cunha, Emanuel; Zeidan, Ahmad; Dias, Oscar | Artigo em ata de conferência | Acesso aberto |
| 2021 | Unveiling the production of metabolites with flavor enhancement through genome-scale metabolic modelling of a lambic beer microbial community | Fernandes, Ana Isabel Gomes | Dissertação de mestrado | Acesso aberto |
