1. Universidade do Minho
  2. Escola de Engenharia | School of Engineering
  3. Centro de Engenharia Biológica | Centre of Biological Engineering
  4. CEB - Publicações em Revistas/Séries Internacionais / Publications in International Journals/Series
Utilize este identificador para referenciar este registo: https://hdl.handle.net/1822/63866

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dc.contributor.authorStrepis, Nikolaospor
dc.contributor.authorNaranjo, Henry D.por
dc.contributor.authorMeier-Kolthoff, Janpor
dc.contributor.authorGöker, Markuspor
dc.contributor.authorShapiro, Nicolepor
dc.contributor.authorKyrpides, Nikospor
dc.contributor.authorKlenk, Hans-Peterpor
dc.contributor.authorSchaap, Peter J.por
dc.contributor.authorStams, Alfons Johannes Mariapor
dc.contributor.authorSousa, Diana Zita Machadopor
dc.date.accessioned2020-02-11T09:03:18Z-
dc.date.available2020-02-11T09:03:18Z-
dc.date.issued2020-
dc.identifier.citationStrepis, Nikolaos; Naranjo, Henry D.; Meier-Kolthoff, Jan; Göker, Markus; Shapiro, Nicole; Kyrpides, Nikos; Klenk, Hans-Peter; Schaap, Peter J.; Stams, A. J. M.; Sousa, Diana Z., Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species. BMC Genomics, 21(1), 24-24, 2020por
dc.identifier.issn1471-2164por
dc.identifier.urihttps://hdl.handle.net/1822/63866-
dc.descriptionThe data from this study are available in the manuscript and additional file. Genomic data are deposited in public databases (accession numbers are provided in Additional File 1: Table S1). The genomic sequence data of Trichococcus strain ES5 that supports the findings of this study have been deposited in GenBank with accession codes GCA_900067165.1, GCF_900067165.1. Supplementary information accompanies this paper at https://doi.org/10. 1186/s12864-019-6410-x.por
dc.description.abstractThe genus Trichococcus currently contains nine species: T. flocculiformis, T. pasteurii, T. palustris, T. collinsii, T. patagoniensis, T. ilyis, T. paludicola, T. alkaliphilus, and T. shcherbakoviae. In general, Trichococcus species can degrade a wide range of carbohydrates. However, only T. pasteurii and a non-characterized strain of Trichococcus, strain ES5, have the capacity of converting glycerol to mainly 1,3-propanediol. Comparative genomic analysis of Trichococcus species provides the opportunity to further explore the physiological potential and uncover novel properties of this genus.por
dc.description.sponsorshipThis research was supported by the European Research Council under the European Union’s Seventh Framework Programme / ERC Grant Agreement (323009) and by the Gravitation grant (024.002.002) of the Netherlands Ministry of Education, Culture and Science. The work conducted by the U.S. Department of Energy Joint Genome Institute (DOE-JGI), a DOE Office of Science User Facility, was supported by the Office of Science of the DOE under Contract No. DE-AC02-05CH11231. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript.eng
dc.language.isoengpor
dc.publisherBMCpor
dc.relationinfo:eu-repo/grantAgreement/EC/FP7/323009/EUpor
dc.rightsopenAccesspor
dc.subjectComparative genomicspor
dc.subjectProtein domainspor
dc.subjectHalophilicpor
dc.subjectPsychrophilicpor
dc.subject1,3-propanediolpor
dc.subject1por
dc.subject3-propanediolpor
dc.titleGenome-guided analysis allows the identification of novel physiological traits in Trichococcus speciespor
dc.typearticle-
dc.peerreviewedyespor
dc.relation.publisherversionhttp://www.biomedcentral.com/bmcgenomicspor
dc.commentsCEB53404por
oaire.citationIssue1por
oaire.citationVolume21por
dc.date.updated2020-01-12T12:42:56Z-
dc.identifier.doi10.1186/s12864-019-6410-xpor
dc.identifier.pmid31914924por
dc.description.publicationversioninfo:eu-repo/semantics/publishedVersion-
dc.subject.wosScience & Technologypor
sdum.journalBMC Genomicspor
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