Utilize este identificador para referenciar este registo: http://hdl.handle.net/1822/56276

TítuloBlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results
Autor(es)Blanco-Míguez, Aitor
Fdez-Riverola, Florentino
Sánchez, Borja
Lourenço, Anália
DataOut-2018
EditoraPublic Library of Science
RevistaPLoS One
CitaçãoBlanco-Míguez, Aitor; Fdez-Riverola, Florentino; Sánchez, Borja; Lourenço, Anália, BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results. PLoS One, 13(10), 2018
Resumo(s)Background The wide range of potential applications has made the Basic Local Alignment Search Tool (BLAST) a ubiquitous tool in the field of Molecular Biology. Within this context, it is increasingly appealing to embed BLAST services within larger Web applications. Results This work introduces BlasterJS viewer, a new JavaScript library for the lightweight development of Web-based applications supporting the visualisation of BLAST outputs. BlasterJS detaches from similar data viewers by focusing on the visual and interactive display of sequence similarity results and being completely independent of BLAST services. BlasterJS is compatible with the text outputs generated by the BLAST family of programs, namely BLASTp, BLASTn, BLASTx, tBLASTn, and tBLASTx, and works in all major Web browsers. Furthermore, BlasterJS is available through the EBIs BioJS registry 5, which extends its potential use to a wider scope of bioinformatics applications. Conclusions BlasterJS is new Javascript library that enables easy and seamless integration of visual and interactive representations of BLAST outputs in Web-based applications supporting sequence similarity search. BlasterJS is free accessible at http://sing-group.org/blasterjs/.
Tipoarticle
URIhttp://hdl.handle.net/1822/56276
DOI10.1371/journal.pone.0205286
e-ISSN1932-6203
Versão da editorahttp://journals.plos.org/plosone/
Arbitragem científicayes
AcessoopenAccess
Aparece nas coleções:CEB - Publicações em Revistas/Séries Internacionais / Publications in International Journals/Series

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