Please use this identifier to cite or link to this item: http://hdl.handle.net/1822/23883

TitleA machine learning and chemometrics assisted interpretation of spectroscopic data : a NMR-based metabolomics platform for the assessment of Brazilian propolis
Author(s)Maraschin, Marcelo
Somensi-Zeggio, A.
Oliveira, S. K.
Kuhnen, S.
Tomazzoli, M. M.
Zeri, A. C. M.
Carreira, Rafael
Rocha, Miguel
KeywordsSupervised classification techniques
Evolutionary algorithms
Random forest
PLS-DA
Wrapper methods
NMR-based metabolomics
Issue date2012
PublisherSpringer Verlag
JournalLecture Notes in Computer Science
Abstract(s)In this work, a metabolomics dataset from 1H nuclear magnetic resonance spectroscopy of Brazilian propolis was analyzed using machine learning algorithms, including feature selection and classification methods. Partial least square-discriminant analysis (PLS-DA), random forest (RF), and wrapper methods combining decision trees and rules with evolutionary algorithms (EA) showed to be complementary approaches, allowing to obtain relevant information as to the importance of a given set of features, mostly related to the structural fingerprint of aliphatic and aromatic compounds typically found in propolis, e.g., fatty acids and phenolic compounds. The feature selection and decision tree-based algorithms used appear to be suitable tools for building classification models for the Brazilian propolis metabolomics regarding its geographic origin, with consistency, high accuracy, and avoiding redundant information as to the metabolic signature of relevant compounds.
TypeConference paper
URIhttp://hdl.handle.net/1822/23883
ISBN9783642341229
DOI10.1007/978-3-642-34123-6_12
ISSN0302-9743
Peer-Reviewedyes
AccessOpen access
Appears in Collections:CCTC - Artigos em revistas internacionais

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