Browsing by subject Metabolic engineering

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Issue DateTitleAuthor(s)TypeAccess
2006Adaptive evolution of a recombinant lactose-consuming Saccharomyces cerevisiae strainGuimarães, Pedro M. R.; Parrou, J. L.; Le Berre, V., et al.AbstractOpen access
30-Dec-2014An integrated network visualization framework towards metabolic engineering applicationsNoronha, Alberto; Vilaça, Paulo; Rocha, MiguelArticleOpen access
2018Analyzing and designing cell factories with OptFluxVilaça, Paulo Ricardo Carvalho; Maia, Paulo; Giesteira, Hugo Miguel Melo, et al.Book partRestricted access (UMinho)
2014CBFA : phenotype prediction integrating metabolic models with constraints derived from experimental dataCarreira, Rafael; Evangelista, Pedro; Maia, Paulo, et al.ArticleOpen access
2015Co-evolution of strain design methods based on flux balance and elementary mode analysisMachado, D.; Herrgård, MarkusArticleOpen access
Mar-2011A computational tool for the simulation and optimization of microbial strains accounting integrated metabolic/ regulatory informationVilaça, Paulo; Rocha, I.; Rocha, MiguelArticleOpen access
21-Jun-2017A critical evaluation of automatic atom mapping algorithms and toolsOsório, Nuno; Vilaça, P.; Rocha, MiguelConference paperOpen access
2016A critical evaluation of automatic atom mapping algorithms and toolsOsório, Nuno Manuel CarneiroMaster thesis Open access
2008Design and application of genome-scale reconstructed metabolic modelsRocha, I.; Förster, Jochen; Nielsen, JensBook partRestricted access (UMinho)
Feb-2015Development and application of efficient pathway enumeration algorithms for metabolic engineering applicationsLiu, Filipe; Vilaça, Paulo; Rocha, I., et al.ArticleOpen access
Mar-2017Development of a framework for metabolic pathway analysis-driven strain optimization methodsVieira, Vítor; Maia, Paulo; Rocha, Isabel, et al.ArticleOpen access
Jun-2016Development of an integrated framework for minimal cut set enumeration in constraint-based modelsVieira, Vítor; Maia, Paulo; Rocha, Isabel, et al.Conference paperRestricted access (UMinho)
1-Jul-2008Evaluating evolutionary multiobjective algorithms for the in silico optimization of mutant strainsMaia, Paulo; Rocha, I.; Ferreira, E. C., et al.Conference paperOpen access
2007Evaluating simulated annealing algorithms in the optimization of bacterial strainsRocha, Miguel; Mendes, Rui; Maia, Paulo, et al.Conference paperOpen access
2011Genome scale metabolic network reconstruction of pathogen – Enterococcus faecalisPortela, Carla; Villas-Bôas, S. G.; Ferreira, E. C., et al.AbstractOpen access
16-Dec-2013Genome scale metabolic network reconstruction of the pathogen Enterococcus faecalisPortela, Carla; Villas-Bôas, S. G.; Rocha, I., et al.Conference paperOpen access
Aug-2018Heterologous production of resveratrol in bacterial hosts: currentstatus and perspectivesBraga, Adelaide; Ferreira, Patrícia; Oliveira, J., et al.ArticleOpen access
Nov-2011Highlighting metabolic strategies using network analysis over strain optimization resultsPinto, José P.; Rocha, I.; Rocha, MiguelConference paperOpen access
2019In silico predictions for fucoxanthin production by the diatom Phaeodactylum tricornutumBauer, Claudia M.; Vilaça, P.; Ramlov, Fernanda, et al.Conference paperRestricted access (UMinho)
2014iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactisDias, Oscar; Pereira, R. M.; Gombert, Andreas Karoly, et al.ArticleOpen access